1ULC Sugar Binding Protein date Sep 12, 2003
title Cgl2 In Complex With Lactose
authors P.J.Walser, P.W.Haebel, M.Kuenzler, U.Kues, M.Aebi, N.Ban
compound source
Molecule: Galectin-2
Chain: A, B
Synonym: Cgl2
Engineered: Yes
Organism_scientific: Coprinopsis Cinerea
Organism_taxid: 5346
Gene: Cgl2
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_strain: Sey6210
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pyade4
symmetry Space Group: P 43 21 2
R_factor 0.210 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.220 65.220 240.286 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand BGC, GAL enzyme
related structures by homologous chain: 1ULF
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and functional analysis of the fungal galectin CGL2., Walser PJ, Haebel PW, Kunzler M, Sargent D, Kues U, Aebi M, Ban N, Structure (Camb) 2004 Apr;12(4):689-702. PMID:15062091
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (1ulc.pdb1.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 1ULC
  • CSU: Contacts of Structural Units for 1ULC
  • Likely Quarternary Molecular Structure file(s) for 1ULC
  • Structure Factors (130 Kb)
  • Retrieve 1ULC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ULC from S2C, [Save to disk]
  • Re-refined 1ulc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ULC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ULC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ULC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ulca_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ulcb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ulc] [1ulc_A] [1ulc_B]
  • SWISS-PROT database: [Q9P4R8]
  • Domain organization of [CGL2_COPCI] by SWISSPFAM
  • Domains found in 1ULC: [GLECT] [Gal-bind_lectin ] by SMART
  • Other resources with information on 1ULC
  • Community annotation for 1ULC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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