OCA Atlas for 1UTD

1UTD

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

TRP

enzyme

related structures

by homologous chain: 1C9S, 1QAW

Gene
Ontology

Chain	Function	Process	Component
C, U, G, N, B, V, O, L, A, S, E, I, P, R, T, D, M, J, Q, K, H, F

Primary reference

The interaction of RNA with TRAP: the role of triplet repeats and separating spacer nucleotides., Hopcroft NH, Manfredo A, Wendt AL, Brzozowski AM, Gollnick P, Antson AA, J Mol Biol. 2004 Apr 16;338(1):43-53. PMID:15050822

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (287 Kb) [Save to disk]

Biological Unit Coordinates (1utd.pdb1.gz) 133 Kb

Biological Unit Coordinates (1utd.pdb2.gz) 147 Kb

LPC: Ligand-Protein Contacts for 1UTD

CSU: Contacts of Structural Units for 1UTD

Likely Quarternary Molecular Structure file(s) for 1UTD

Structure Factors (768 Kb)

Retrieve 1UTD in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1UTD from S2C, [Save to disk]

Re-refined 1utd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UTD in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1utd_H] [1utd_G] [1utd_I] [1utd_J] [1utd_U] [1utd_V] [1utd_Z] [1utd] [1utd_0] [1utd_1] [1utd_2] [1utd_3] [1utd_4] [1utd_5] [1utd_6] [1utd_7] [1utd_8] [1utd_9] [1utd_A] [1utd_B] [1utd_C] [1utd_D] [1utd_E] [1utd_F] [1utd_K] [1utd_L] [1utd_M] [1utd_N] [1utd_O] [1utd_P] [1utd_Q] [1utd_R] [1utd_S] [1utd_T]

SWISS-PROT database: [Q9X6J6]

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