1V4T Crystal structure of human glucokinase date
authors Kamata, K., Mitsuya, M., Nishimura, T., Eiki, J., Nagata, Y.
compound source
symmetry
R_factor
R_Free 0.307
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.40
ligand NA, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase., Kamata K, Mitsuya M, Nishimura T, Eiki J, Nagata Y, Structure (Camb) 2004 Mar;12(3):429-38. PMID:15016359
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1v4t.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 1V4T
  • CSU: Contacts of Structural Units for 1V4T
  • Likely Quarternary Molecular Structure file(s) for 1V4T
  • Structure Factors (108 Kb)
  • Retrieve 1V4T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V4T from S2C, [Save to disk]
  • Re-refined 1v4t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1V4T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1V4T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1V4T, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1v4ta1, region A:15-218 [Jmol] [rasmolscript] [script source]
        - Domain d1v4ta2, region A:219-461 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v4t_A] [1v4t]
  • SWISS-PROT database: [P35557]
  • Domain organization of [HXK4_HUMAN] by SWISSPFAM
  • Other resources with information on 1V4T
  • Community annotation for 1V4T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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