1VDH		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A, E, D, C, B peroxidase activity
Primary reference	Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8., Ebihara A, Okamoto A, Kousumi Y, Yamamoto H, Masui R, Ueyama N, Yokoyama S, Kuramitsu S, J Struct Funct Genomics 2005;6(1):21-32. PMID:15965735

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (222 Kb) [Save to disk] Biological Unit Coordinates (1vdh.pdb1.gz) 217 Kb CSU: Contacts of Structural Units for 1VDH Likely Quarternary Molecular Structure file(s) for 1VDH Structure Factors (935 Kb) Retrieve 1VDH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VDH from S2C, [Save to disk] Re-refined 1vdh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VDH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vdh] [1vdh_A] [1vdh_B] [1vdh_C] [1vdh_D] [1vdh_E] SWISS-PROT database: [Q5SHL6]

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