1VJM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 2 Modelsresolution
related structures by homologous chain: 1AP9, 1IW6
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity


    • Primary referenceDeformation of helix C in the low temperature L-intermediate of bacteriorhodopsin., Edman K, Royant A, Larsson G, Jacobson F, Taylor T, van der Spoel D, Landau EM, Pebay-Peyroula E, Neutze R, J Biol Chem 2004 Jan 16;279(3):2147-58. Epub 2003 Oct 7. PMID:14532280
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (1vjm.pdb1.gz) 106 Kb
  • Biological Unit Coordinates (1vjm.pdb2.gz) 36 Kb
  • CSU: Contacts of Structural Units for 1VJM
  • Likely Quarternary Molecular Structure file(s) for 1VJM
  • Structure Factors (82 Kb)
  • Retrieve 1VJM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VJM from S2C, [Save to disk]
    • View 1VJM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vjm] [1vjm_A]
  • SWISS-PROT database: [P02945]
  • Belongs to the ion-translocating microbial rhodopsin (mr) family according to TCDB.
  • Domain found in 1VJM: [Bac_rhodopsin ] by SMART

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