1VLL Crystal structure of alanine dehydrogenase (AF1665) from Archaeoglobus fulgidus at 2.80 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.2539
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
related structures by homologous chain: 1OMO
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (1vll.pdb1.gz) 89 Kb
  • CSU: Contacts of Structural Units for 1VLL
  • Likely Quarternary Molecular Structure file(s) for 1VLL
  • Structure Factors (2971 Kb)
  • Retrieve 1VLL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VLL from S2C, [Save to disk]
  • Re-refined 1vll structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1VLL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1VLL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1VLL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1vlla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1vllb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vll_A] [1vll] [1vll_B]
  • SWISS-PROT database: [O28608]
  • Domain organization of [O28608_ARCFU] by SWISSPFAM
  • Other resources with information on 1VLL
  • Community annotation for 1VLL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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