1VRA Transferase date Feb 17, 2005
title Crystal Structure Of Arginine Biosynthesis Bifunctional Prot (10175521) From Bacillus Halodurans At 2.00 A Resolution
authors Joint Center For Structural Genomics (Jcsg)
compound source
Molecule: Arginine Biosynthesis Bifunctional Protein Argj
Chain: A
Fragment: Alpha Chain, Residues 1-196
Ec: 2.3.1.35, 2.3.1.1
Engineered: Yes
Organism_scientific: Bacillus Halodurans
Organism_taxid: 86665
Gene: Argj
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Other_details: Both Chain A And Chain B Were Expressed From Construct Which Encodes Residues 1-411 Of The Argj Gene;

Molecule: Arginine Biosynthesis Bifunctional Protein Argj
Chain: B
Fragment: Beta Chain, Residues 197-411
Ec: 2.3.1.35, 2.3.1.1
Engineered: Yes

Organism_scientific: Bacillus Halodurans
Organism_taxid: 86665
Gene: Argj
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Other_details: Both Chain A And Chain B Were Expressed From Construct Which Encodes Residues 1-411 Of The Argj Gene
symmetry Space Group: P 41 21 2
R_factor 0.140 R_Free 0.158
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.658 70.658 222.292 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand EDO, MSE, SO4, UNL enzyme Transferase E.C.2.3.1.35 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1vra.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (1vra.pdb2.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 1VRA
  • CSU: Contacts of Structural Units for 1VRA
  • Likely Quarternary Molecular Structure file(s) for 1VRA
  • Structure Factors (8197 Kb)
  • Retrieve 1VRA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VRA from S2C, [Save to disk]
  • Re-refined 1vra structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1VRA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1VRA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1VRA, from MSDmotif at EBI
  • Fold representative 1vra from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vra] [1vra_B] [1vra_A]
  • SWISS-PROT database: [Q9K8V3]
  • Domain organization of [ARGJ_BACHD] by SWISSPFAM
  • Other resources with information on 1VRA
  • Community annotation for 1VRA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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