1VYR		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FMN, TNF	enzyme
note	1VYR is a representative structure
related structures	by homologous chain: 1VYP
Gene Ontology	Chain Function Process Component A
Primary reference	Atomic resolution structures and solution behavior of enzyme-substrate complexes of Enterobacter cloacae PB2 pentaerythritol tetranitrate reductase. Multiple conformational states and implications for the mechanism of nitroaromatic explosive degradation., Khan H, Barna T, Harris RJ, Bruce NC, Barsukov I, Munro AW, Moody PC, Scrutton NS, J Biol Chem. 2004 Jul 16;279(29):30563-72. Epub 2004 May 5. PMID:15128738

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk] Biological Unit Coordinates (1vyr.pdb1.gz) 179 Kb LPC: Ligand-Protein Contacts for 1VYR CSU: Contacts of Structural Units for 1VYR Likely Quarternary Molecular Structure file(s) for 1VYR Structure Factors (2541 Kb) Retrieve 1VYR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VYR from S2C, [Save to disk] Re-refined 1vyr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VYR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vyr] [1vyr_A] SWISS-PROT database: [P71278]

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