1WCC Transferase date Nov 12, 2004
title Screening For Fragment Binding By X-Ray Crystallography
authors A.Cleasby, M.O'Reilly, M.J.Hartshorn, C.W.Murray, I.J.Tickle, H.J M.Frederickson
compound source
Molecule: Cell Division Protein Kinase 2
Chain: A
Synonym: Cyclin Dependent Kinase 2, P33 Protein Kinase
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.177 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.268 71.713 72.213 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand CIG BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1KE5, 1Y91
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFragment-based lead discovery using X-ray crystallography., Hartshorn MJ, Murray CW, Cleasby A, Frederickson M, Tickle IJ, Jhoti H, J Med Chem. 2005 Jan 27;48(2):403-13. PMID:15658854
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1wcc.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1WCC
  • CSU: Contacts of Structural Units for 1WCC
  • Likely Quarternary Molecular Structure file(s) for 1WCC
  • Retrieve 1WCC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WCC from S2C, [Save to disk]
  • View 1WCC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WCC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WCC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wcc_A] [1wcc]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 1WCC: [S_TKc ] by SMART
  • Other resources with information on 1WCC
  • Community annotation for 1WCC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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