1WE0 Oxidoreductase date May 21, 2004
title Crystal Structure Of Peroxiredoxin (Ahpc) From Amphibacillus
authors K.Kitano, A.Kita, T.Hakoshima, Y.Niimura, K.Miki
compound source
Molecule: Alkyl Hydroperoxide Reductase C
Chain: A, B, C, D, E, F, G, H, I, J
Synonym: Peroxiredoxin, Ahpc
Ec: 1.11.1.-
Engineered: Yes
Organism_scientific: Amphibacillus Xylanus
Organism_taxid: 1449
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pahno2.5
symmetry Space Group: P 1
R_factor 0.208 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.216 79.319 104.449 77.22 82.33 80.08
method X-Ray Diffractionresolution 2.90 Å
ligand NH4 enzyme Oxidoreductase E.C.1.11.1 BRENDA
related structures by homologous chain: 1KYG
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, E, B, H, C, D, I, G
  • peroxidase activity
  • antioxidant activity
  • peroxiredoxin activity


  • Primary referenceCrystal structure of decameric peroxiredoxin (AhpC) from Amphibacillus xylanus., Kitano K, Kita A, Hakoshima T, Niimura Y, Miki K, Proteins 2005 May 15;59(3):644-7. PMID:15770647
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (248 Kb) [Save to disk]
  • Biological Unit Coordinates (1we0.pdb1.gz) 242 Kb
  • LPC: Ligand-Protein Contacts for 1WE0
  • CSU: Contacts of Structural Units for 1WE0
  • Likely Quarternary Molecular Structure file(s) for 1WE0
  • Retrieve 1WE0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WE0 from S2C, [Save to disk]
  • View 1WE0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WE0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WE0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1we0_E] [1we0_F] [1we0_J] [1we0_G] [1we0_I] [1we0_D] [1we0_C] [1we0_B] [1we0_H] [1we0_A] [1we0]
  • SWISS-PROT database: [O87200]
  • Domain organization of [O87200_9BACI] by SWISSPFAM
  • Other resources with information on 1WE0
  • Community annotation for 1WE0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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