1WFX	Transferase	date	May 27, 2004
title	Crystal Structure Of Ape0204 From Aeropyrum Pernix
authors	M.Kato-Murayama, Y.Bessho, M.Shirouzu, S.Yokoyama, Riken Structu Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Probable Rna 2'-Phosphotransferase Chain: A Fragment: Residues 1-186 Synonym: Rna 2'-Phosphotransferase, Ape0204 Protein Ec: 2.7.-.- Engineered: Yes		Organism_scientific: Aeropyrum Pernix Organism_taxid: 56636 Gene: Ape0204 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a
symmetry	Space Group: H 3 2	R_factor 0.220 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 102.667 102.667 101.489 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	CL, MSE, ZN	enzyme	Transferase E.C.2.7 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structure of the RNA 2'-Phosphotransferase from Aeropyrum pernix K1., Kato-Murayama M, Bessho Y, Shirouzu M, Yokoyama S, J Mol Biol 2005 Apr 29;348(2):295-305. PMID:15811369

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (1wfx.pdb1.gz) 30 Kb Biological Unit Coordinates (1wfx.pdb2.gz) 88 Kb LPC: Ligand-Protein Contacts for 1WFX CSU: Contacts of Structural Units for 1WFX Likely Quarternary Molecular Structure file(s) for 1WFX Retrieve 1WFX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WFX from S2C, [Save to disk]

View 1WFX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WFX

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WFX, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1wfxa_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wfx_A] [1wfx] SWISS-PROT database: [Q9YFP5] Domain organization of [KPTA_AERPE] by SWISSPFAM

Other resources with information on 1WFX

Community annotation for 1WFX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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