1WWG Viral Protein Rna date Jan 05, 2005
title Nmr Structure Determined For Mlv Nc Complex With Rna Sequenc
authors A.Dey, D.York, A.Smalls-Mantey, M.F.Summers
compound source
Molecule: 5'-R(Pupapupcpupg)-3'
Chain: B
Engineered: Yes
 Synthetic: Yes

Molecule: Nucleoprotein P10
Chain: A
Synonym: Nucleocapsid Protein
Engineered: Yes
Organism_scientific: Moloney Murine Leukemia Virus
Organism_taxid: 11801
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1
methodSolution NMR
ligand ZN enzyme
note 1WWG is a representative structure
related structures by homologous chain: 1A6B, 1WWF
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceComposition and sequence-dependent binding of RNA to the nucleocapsid protein of Moloney murine leukemia virus(,)., Dey A, York D, Smalls-Mantey A, Summers MF, Biochemistry 2005 Mar 15;44(10):3735-44. PMID:15751950
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (370 Kb) [Save to disk]
  • Biological Unit Coordinates (1wwg.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 1WWG
  • CSU: Contacts of Structural Units for 1WWG
  • Original NMR restraints for 1WWG from PDB
  • Retrieve 1WWG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WWG from S2C, [Save to disk]
    • View 1WWG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WWG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WWG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wwg_A] [1wwg_B] [1wwg]
  • SWISS-PROT database: [P03332]
  • Domain organization of [GAG_MLVMO] by SWISSPFAM
  • Domain found in 1WWG: [ZnF_C2HC ] by SMART
    • Other resources with information on 1WWG
  • Community annotation for 1WWG at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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