1WWH	Protein Transport	date	Jan 05, 2005
title	Crystal Structure Of The Mppn Domain Of Mouse Nup35
authors	N.Handa, K.Murayama, M.Kukimoto, H.Hamana, T.Uchikubo, C.Takemoto, T.Terada, M.Shirouzu, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Nucleoporin 35 Chain: A, B, C, D Fragment: Rrm-Like Domain Synonym: Nucleoporin Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Other_details: Cell-Free Protein Synthesis
symmetry	Space Group: P 21 21 21	R_factor 0.211 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.486 104.237 110.039 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
note	1WWH is a representative structure
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The crystal structure of mouse Nup35 reveals atypical RNP motifs and novel homodimerization of the RRM domain., Handa N, Kukimoto-Niino M, Akasaka R, Kishishita S, Murayama K, Terada T, Inoue M, Kigawa T, Kose S, Imamoto N, Tanaka A, Hayashizaki Y, Shirouzu M, Yokoyama S, J Mol Biol. 2006 Oct 13;363(1):114-24. Epub 2006 Aug 3. PMID:16962612

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (1wwh.pdb1.gz) 53 Kb CSU: Contacts of Structural Units for 1WWH Likely Quarternary Molecular Structure file(s) for 1WWH Retrieve 1WWH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WWH from S2C, [Save to disk]

View 1WWH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WWH

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WWH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wwh_B] [1wwh_C] [1wwh] [1wwh_A] [1wwh_D] SWISS-PROT database: [Q8R4R6] Domain organization of [NUP53_MOUSE] by SWISSPFAM

Other resources with information on 1WWH

Community annotation for 1WWH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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