1XDN		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ATP, MG, MSE	enzyme
note	1XDN is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1., Deng J, Schnaufer A, Salavati R, Stuart KD, Hol WG, J Mol Biol 2004 Oct 22;343(3):601-13. PMID:15465048

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (1xdn.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 1XDN CSU: Contacts of Structural Units for 1XDN Likely Quarternary Molecular Structure file(s) for 1XDN Structure Factors (1060 Kb) Retrieve 1XDN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XDN from S2C, [Save to disk] Re-refined 1xdn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XDN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xdn] [1xdn_A] SWISS-PROT database: [Q38FA5]

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