1XFB	Lyase	date	Sep 14, 2004
title	Human Brain Fructose 1,6-(Bis)Phosphate Aldolase (C Isozyme)
authors	T.L.Arakaki, J.A.Pezza, M.A.Cronin, C.E.Hopkins, D.B.Zimmer, D.R. K.N.Allen
compound		source
Molecule: Aldolase C Chain: A, B, C, D, E, F, G, H, I, J, K, L Synonym: Fructose 1,6-(Bis)Phosphate Aldolase Ec: 4.1.2.13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5alpha Expression_system_vector_type: Plasmid Expression_system_plasmid: Ppb1
symmetry	Space Group: P 1	R_factor 0.255 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.872 121.986 129.517 107.96 108.58 97.39
method	X-Ray Diffraction	resolution	3.00 Å
ligand		enzyme	Lyase E.C.4.1.2.13 BRENDA
related structures	by homologous chain: 1XDM, 4ALD
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L cytoskeletal protein binding...
Primary reference	Structure of human brain fructose 1,6-(bis)phosphate aldolase: linking isozyme structure with function., Arakaki TL, Pezza JA, Cronin MA, Hopkins CE, Zimmer DB, Tolan DR, Allen KN, Protein Sci 2004 Dec;13(12):3077-84. Epub 2004 Nov 10. PMID:15537755

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (578 Kb) [Save to disk] Biological Unit Coordinates (1xfb.pdb1.gz) 194 Kb Biological Unit Coordinates (1xfb.pdb2.gz) 194 Kb Biological Unit Coordinates (1xfb.pdb3.gz) 196 Kb CSU: Contacts of Structural Units for 1XFB Likely Quarternary Molecular Structure file(s) for 1XFB Structure Factors (966 Kb) Retrieve 1XFB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XFB from S2C, [Save to disk] Re-refined 1xfb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XFB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1XFB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1XFB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xfb_D] [1xfb_I] [1xfb_L] [1xfb_B] [1xfb_J] [1xfb_K] [1xfb_E] [1xfb_G] [1xfb_H] [1xfb] [1xfb_C] [1xfb_A] [1xfb_F] SWISS-PROT database: [P09972] Domain organization of [ALDOC_HUMAN] by SWISSPFAM

Other resources with information on 1XFB

Community annotation for 1XFB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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