1XOD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
note 1XOD is a representative structure
Primary reference1.15A Crystal structure of the X. tropicalis Spred1 EVH1 domain suggests a fourth distinct peptide-binding mechanism within the EVH1 family., Harmer NJ, Sivak JM, Amaya E, Blundell TL, FEBS Lett 2005 Feb 14;579(5):1161-6. PMID:15710406
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (1xod.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (1xod.pdb2.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1XOD
  • CSU: Contacts of Structural Units for 1XOD
  • Likely Quarternary Molecular Structure file(s) for 1XOD
  • Structure Factors (870 Kb)
  • Retrieve 1XOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XOD from S2C, [Save to disk]
  • Re-refined 1xod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xod] [1xod_A] [1xod_B]
  • SWISS-PROT database: [Q66JG9]
  • Domain found in 1XOD: [WH1 ] by SMART

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