OCA Atlas for 1XXH

1XXH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

AGS, MSE, PO4, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, D, H, I, G, B
E, J	DNA-directed DNA polymerase ... 3'-5' exonuclease activity
F, A	DNA-directed DNA polymerase ...

Primary reference

Structural analysis of the inactive state of the Escherichia coli DNA polymerase clamp-loader complex., Kazmirski SL, Podobnik M, Weitze TF, O'Donnell M, Kuriyan J, Proc Natl Acad Sci U S A 2004 Nov 30;101(48):16750-5. Epub . PMID:15556993

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (562 Kb) [Save to disk]

Biological Unit Coordinates (1xxh.pdb1.gz) 282 Kb

Biological Unit Coordinates (1xxh.pdb2.gz) 279 Kb

LPC: Ligand-Protein Contacts for 1XXH

CSU: Contacts of Structural Units for 1XXH

Likely Quarternary Molecular Structure file(s) for 1XXH

Structure Factors (674 Kb)

Retrieve 1XXH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1XXH from S2C, [Save to disk]

Re-refined 1xxh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XXH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xxh] [1xxh_A] [1xxh_B] [1xxh_C] [1xxh_D] [1xxh_E] [1xxh_F] [1xxh_G] [1xxh_H] [1xxh_I] [1xxh_J]

SWISS-PROT database: [P06710] [P28630] [P28631]

Domain found in 1XXH: [AAA ] by SMART

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