1Y56		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ATP, CL, CXS, FAD, FE, FMN, SO4	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	Crystal structure of a novel FAD-, FMN-, and ATP-containing L-proline dehydrogenase complex from Pyrococcus horikoshii., Tsuge H, Kawakami R, Sakuraba H, Ago H, Miyano M, Aki K, Katunuma N, Ohshima T, J Biol Chem. 2005 Sep 2;280(35):31045-9. Epub 2005 Jul 15. PMID:16027125

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk] Biological Unit Coordinates (1y56.pdb1.gz) 555 Kb Biological Unit Coordinates (1y56.pdb2.gz) 142 Kb Biological Unit Coordinates (1y56.pdb3.gz) 82 Kb Biological Unit Coordinates (1y56.pdb4.gz) 64 Kb LPC: Ligand-Protein Contacts for 1Y56 CSU: Contacts of Structural Units for 1Y56 Likely Quarternary Molecular Structure file(s) for 1Y56 Structure Factors (297 Kb) Retrieve 1Y56 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y56 from S2C, [Save to disk] Re-refined 1y56 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y56 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y56] [1y56_A] [1y56_B] SWISS-PROT database: [O59088] [Q5R1N3]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---