1Y9A	Alcohol Dehydrogenase from Entamoeba histolotica in complex with cacodylate	date
authors	Shimon, L.J., Peretz, M., Goihberg, E., Burstein, Y., Frolow, F.
compound		source
symmetry		R_factor R_Free 0.17707
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.81
ligand	ACT, CAC, EDO, MG, OHS, ZN	enzyme
Gene Ontology	Chain Function Process Component A, C
Primary reference	Structure of alcohol dehydrogenase from Entamoeba histolytica., Shimon LJ, Goihberg E, Peretz M, Burstein Y, Frolow F, Acta Crystallogr D Biol Crystallogr. 2006 May;62(Pt 5):541-7. Epub 2006, Apr 19. PMID:16627948

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (258 Kb) [Save to disk] Biological Unit Coordinates (1y9a.pdb1.gz) 499 Kb LPC: Ligand-Protein Contacts for 1Y9A CSU: Contacts of Structural Units for 1Y9A Likely Quarternary Molecular Structure file(s) for 1Y9A Structure Factors (604 Kb) Retrieve 1Y9A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y9A from S2C, [Save to disk] Re-refined 1y9a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y9A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Y9A

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1Y9A, from MSDmotif at EBI Fold representative 1y9a from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y9a_A] [1y9a_C] [1y9a] SWISS-PROT database: [P35630] Domain organization of [ADH1_ENTHI] by SWISSPFAM

Other resources with information on 1Y9A

Community annotation for 1Y9A at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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