1Y9A	Oxidoreductase	date	Dec 15, 2004
title	Alcohol Dehydrogenase From Entamoeba Histolotica In Complex Cacodylate
authors	L.J.Shimon, M.Peretz, E.Goihberg, Y.Burstein, F.Frolow
compound		source
Molecule: Nadp-Dependent Alcohol Dehydrogenase Chain: A, C Ec: 1.1.1.2 Engineered: Yes		Organism_scientific: Entamoeba Histolytica Organism_taxid: 5759 Gene: Adh1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tg-I Expression_system_vector_type: Plasmid Expression_system_plasmid: Bs-P58
symmetry	Space Group: C 2 2 21	R_factor 0.126 R_Free 0.177
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.891 234.139 96.241 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.81 Å
ligand	ACT, CAC, EDO, MG, OHS, ZN	enzyme	Oxidoreductase E.C.1.1.1.2 BRENDA
Gene Ontology	Chain Function Process Component A, C
Primary reference	Structure of alcohol dehydrogenase from Entamoeba histolytica., Shimon LJ, Goihberg E, Peretz M, Burstein Y, Frolow F, Acta Crystallogr D Biol Crystallogr. 2006 May;62(Pt 5):541-7. Epub 2006, Apr 19. PMID:16627948

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (258 Kb) [Save to disk] Biological Unit Coordinates (1y9a.pdb1.gz) 499 Kb LPC: Ligand-Protein Contacts for 1Y9A CSU: Contacts of Structural Units for 1Y9A Likely Quarternary Molecular Structure file(s) for 1Y9A Structure Factors (604 Kb) Retrieve 1Y9A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y9A from S2C, [Save to disk] Re-refined 1y9a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y9A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Y9A

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Y9A, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y9a_A] [1y9a_C] [1y9a] SWISS-PROT database: [P35630] Domain organization of [ADH1_ENTHI] by SWISSPFAM

Other resources with information on 1Y9A

Community annotation for 1Y9A at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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