1YHZ Transferase date Jan 10, 2005
title Crystal Structure Of Arabidopsis Thaliana Acetohydroxyacid S Complex With A Sulfonylurea Herbicide, Chlorsulfuron
authors J.A.Mccourt, S.S.Pang, J.King-Scott, L.W.Guddat, R.G.Duggleby
compound source
Molecule: Acetolactate Synthase
Chain: A
Fragment: Residues 86-667
Synonym: Acetohydroxy-Acid Synthase, Als
Ec: 2.2.1.6
Engineered: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale Cress
Organism_taxid: 3702
Gene: Ilvb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30a(+)
symmetry Space Group: P 64 2 2
R_factor 0.177 R_Free 0.201
crystal
cell
length a length b length c angle alpha angle beta angle gamma
178.515 178.515 185.683 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand 1CS, CSD, FAD, MG, NHE, P22 enzyme Transferase E.C.2.2.1.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHerbicide-binding sites revealed in the structure of plant acetohydroxyacid synthase., McCourt JA, Pang SS, King-Scott J, Guddat LW, Duggleby RG, Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):569-73. Epub 2006 Jan 10. PMID:16407096
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (1yhz.pdb1.gz) 382 Kb
  • Biological Unit Coordinates (1yhz.pdb2.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 1YHZ
  • CSU: Contacts of Structural Units for 1YHZ
  • Likely Quarternary Molecular Structure file(s) for 1YHZ
  • Structure Factors (725 Kb)
  • Retrieve 1YHZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YHZ from S2C, [Save to disk]
  • Re-refined 1yhz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YHZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1YHZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YHZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yhz_A] [1yhz]
  • SWISS-PROT database: [P17597]
  • Domain organization of [ILVB_ARATH] by SWISSPFAM
  • Other resources with information on 1YHZ
  • Community annotation for 1YHZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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