1YMT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DR9	enzyme
note	1YMT is a representative structure
related structures	by homologous chain: 1YP0
Gene Ontology	Chain Function Process Component A
Primary reference	Structural analyses reveal phosphatidyl inositols as ligands for the NR5 orphan receptors SF-1 and LRH-1., Krylova IN, Sablin EP, Moore J, Xu RX, Waitt GM, MacKay JA, Juzumiene D, Bynum JM, Madauss K, Montana V, Lebedeva L, Suzawa M, Williams JD, Williams SP, Guy RK, Thornton JW, Fletterick RJ, Willson TM, Ingraham HA, Cell 2005 Feb 11;120(3):343-55. PMID:15707893

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (1ymt.pdb1.gz) 54 Kb LPC: Ligand-Protein Contacts for 1YMT CSU: Contacts of Structural Units for 1YMT Likely Quarternary Molecular Structure file(s) for 1YMT Structure Factors (753 Kb) Retrieve 1YMT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YMT from S2C, [Save to disk] Re-refined 1ymt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YMT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ymt] [1ymt_A] [1ymt_B] SWISS-PROT database: [Q62227] [P33242] Domain found in 1YMT: [HOLI ] by SMART

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