1YNT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CD enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, G


Primary referenceCrystal structure of the complex between the monomeric form of Toxoplasma gondii surface antigen 1 (SAG1) and a monoclonal antibody that mimics the human immune response., Graille M, Stura EA, Bossus M, Muller BH, Letourneur O, Battail-Poirot N, Sibai G, Gauthier M, Rolland D, Le Du MH, Ducancel F, J Mol Biol. 2005 Nov 25;354(2):447-58. Epub 2005 Sep 30. PMID:16242717
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (222 Kb) [Save to disk]
  • Biological Unit Coordinates (1ynt.pdb1.gz) 217 Kb
  • LPC: Ligand-Protein Contacts for 1YNT
  • CSU: Contacts of Structural Units for 1YNT
  • Likely Quarternary Molecular Structure file(s) for 1YNT
  • Structure Factors (462 Kb)
  • Retrieve 1YNT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YNT from S2C, [Save to disk]
  • Re-refined 1ynt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YNT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ynt] [1ynt_A] [1ynt_B] [1ynt_C] [1ynt_D] [1ynt_E] [1ynt_F] [1ynt_G]
  • SWISS-PROT database: [P13664]
  • Domains found in 1YNT: [IG_like] [IGv ] by SMART

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