1YPJ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand TYS, UIB enzyme
Gene
Ontology
ChainFunctionProcessComponent
H


L


Primary referenceA Simple Protocol To Estimate Differences in Protein Binding Affinity for Enantiomers without Prior Resolution of Racemates., Fokkens J, Klebe G, Angew Chem Int Ed Engl. 2005 Dec 22;. PMID:16374786
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (1ypj.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1YPJ
  • CSU: Contacts of Structural Units for 1YPJ
  • Likely Quarternary Molecular Structure file(s) for 1YPJ
  • Structure Factors (276 Kb)
  • Retrieve 1YPJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YPJ from S2C, [Save to disk]
  • Re-refined 1ypj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YPJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ypj] [1ypj_H] [1ypj_I] [1ypj_L]
  • SWISS-PROT database: [P00734]
  • Domain found in 1YPJ: [Tryp_SPc ] by SMART

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