1YRX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	D9G, FMN	enzyme
Gene Ontology	Chain Function Process Component B, A, C
Primary reference	Structure of a Novel Photoreceptor, the BLUF Domain of AppA from Rhodobacter sphaeroides(,)., Anderson S, Dragnea V, Masuda S, Ybe J, Moffat K, Bauer C, Biochemistry 2005 Jun 7;44(22):7998-8005. PMID:15924418

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (1yrx.pdb1.gz) 41 Kb Biological Unit Coordinates (1yrx.pdb2.gz) 39 Kb Biological Unit Coordinates (1yrx.pdb3.gz) 78 Kb Biological Unit Coordinates (1yrx.pdb4.gz) 117 Kb LPC: Ligand-Protein Contacts for 1YRX CSU: Contacts of Structural Units for 1YRX Likely Quarternary Molecular Structure file(s) for 1YRX Structure Factors (271 Kb) Retrieve 1YRX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YRX from S2C, [Save to disk] Re-refined 1yrx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YRX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yrx] [1yrx_A] [1yrx_B] [1yrx_C] SWISS-PROT database: [Q53119] Domain found in 1YRX: [BLUF ] by SMART

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