1YUT Metal Binding Protein date Feb 14, 2005
title Solution Structure Of Calcium-S100a13 (Minimized Mean Struct
authors F.Arnesano, L.Banci, I.Bertini, A.Fantoni, L.Tenori, M.S.Viezzoli Structural Proteomics In Europe (Spine)
compound source
Molecule: S100 Calcium-Binding Protein A13
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: S100a13
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21gold(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet21a
Expression_system_plasmid: Pet21s100
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Interplay between Calcium(II) and Copper(II) Binding to S100A13 Protein., Arnesano F, Banci L, Bertini I, Fantoni A, Tenori L, Viezzoli MS, Angew Chem Int Ed Engl 2005 Oct 7;44(39):6341-6344. PMID:16145699
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1yut.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1YUT
  • CSU: Contacts of Structural Units for 1YUT
  • Retrieve 1YUT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YUT from S2C, [Save to disk]
  • View 1YUT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1YUT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YUT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yut_A] [1yut] [1yut_B]
  • SWISS-PROT database: [Q99584]
  • Domain organization of [S10AD_HUMAN] by SWISSPFAM
  • Domain found in 1YUT: [S_100 ] by SMART
  • Other resources with information on 1YUT
  • Community annotation for 1YUT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science