1YWH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ALC, BMA, DLY, DSN, FUC, MAN, NAG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, O, M, I, G, K, A, C


Primary referenceCrystal structure of the human urokinase plasminogen activator receptor bound to an antagonist peptide., Llinas P, Helene Le Du M, Gardsvoll H, Dano K, Ploug M, Gilquin B, Stura EA, Menez A, EMBO J 2005 Apr 7;. PMID:15861141
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (381 Kb) [Save to disk]
  • Biological Unit Coordinates (1ywh.pdb1.gz) 364 Kb
  • Biological Unit Coordinates (1ywh.pdb2.gz) 185 Kb
  • Biological Unit Coordinates (1ywh.pdb3.gz) 187 Kb
  • LPC: Ligand-Protein Contacts for 1YWH
  • CSU: Contacts of Structural Units for 1YWH
  • Likely Quarternary Molecular Structure file(s) for 1YWH
  • Structure Factors (768 Kb)
  • Retrieve 1YWH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YWH from S2C, [Save to disk]
  • Re-refined 1ywh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YWH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ywh] [1ywh_A] [1ywh_B] [1ywh_C] [1ywh_D] [1ywh_E] [1ywh_F] [1ywh_G] [1ywh_H] [1ywh_I] [1ywh_J] [1ywh_K] [1ywh_L] [1ywh_M] [1ywh_N] [1ywh_O] [1ywh_P]
  • SWISS-PROT database: [Q03405]
  • Domain found in 1YWH: [LU ] by SMART

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