1YXK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1YPO, 1YPU
Primary referenceCrystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL., Ohki I, Ishigaki T, Oyama T, Matsunaga S, Xie Q, Ohnishi-Kameyama M, Murata T, Tsuchiya D, Machida S, Morikawa K, Tate S, Structure. 2005 Jun;13(6):905-17. PMID:15939022
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (1yxk.pdb1.gz) 44 Kb
  • CSU: Contacts of Structural Units for 1YXK
  • Likely Quarternary Molecular Structure file(s) for 1YXK
  • Structure Factors (124 Kb)
  • Retrieve 1YXK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YXK from S2C, [Save to disk]
  • Re-refined 1yxk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YXK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yxk] [1yxk_A] [1yxk_B]
  • SWISS-PROT database: [P78380]
  • Domain found in 1YXK: [CLECT ] by SMART

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