1YY4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 4NA BindingDB enzyme
Primary referenceERbeta ligands. 3. Exploiting two binding orientations of the 2-phenylnaphthalene scaffold to achieve ERbeta selectivity., Mewshaw RE, Edsall RJ Jr, Yang C, Manas ES, Xu ZB, Henderson RA, Keith JC Jr, Harris HA, J Med Chem. 2005 Jun 16;48(12):3953-79. PMID:15943471
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (1yy4.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 1YY4
  • CSU: Contacts of Structural Units for 1YY4
  • Likely Quarternary Molecular Structure file(s) for 1YY4
  • Retrieve 1YY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YY4 from S2C, [Save to disk]
  • View 1YY4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yy4] [1yy4_A] [1yy4_B] [1yy4_C] [1yy4_D]
  • SWISS-PROT database: [Q92731] [Q15788]
  • Domain found in 1YY4: [HOLI ] by SMART

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