1YZD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	A5M, CA	enzyme
Primary reference	Crystal structures, reactivity and inferred acylation transition states for 2'-amine substituted RNA., Gherghe CM, Krahn JM, Weeks KM, J Am Chem Soc 2005 Oct 5;127(39):13622-8. PMID:16190727

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (1yzd.pdb1.gz) 14 Kb Biological Unit Coordinates (1yzd.pdb2.gz) 12 Kb LPC: Ligand-Protein Contacts for 1YZD CSU: Contacts of Structural Units for 1YZD Likely Quarternary Molecular Structure file(s) for 1YZD Structure Factors (52 Kb) Retrieve 1YZD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YZD from S2C, [Save to disk] Re-refined 1yzd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YZD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yzd] [1yzd_A] [1yzd_B] [1yzd_C] SWISS-PROT database:

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