1Z8K	Isomerase	date	Mar 30, 2005
title	X-Ray Structure Of Allene Oxide Cyclase From Arabidopsis Tha At3g25770
authors	G.E.Wesenberg, G.N.Phillips Jr., E.Bitto, C.A.Bingman, S.T.M.All Center For Eukaryotic Structural Genomics (Cesg)
compound		source
Molecule: At3g25770 Protein Chain: A, B, C Ec: 5.3.99.6 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Thale Cress Organism_taxid: 3702 Gene: At3g25770 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834 P(Rare2) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pvp-27
symmetry	Space Group: P 21 21 21	R_factor 0.149 R_Free 0.180
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.412 100.013 105.386 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.71 Å
ligand	MSE	enzyme	Isomerase E.C.5.3.99.6 BRENDA
related structures	by homologous chain: 1ZVC
Gene Ontology	Chain Function Process Component A, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk] Biological Unit Coordinates (1z8k.pdb1.gz) 97 Kb LPC: Ligand-Protein Contacts for 1Z8K CSU: Contacts of Structural Units for 1Z8K Likely Quarternary Molecular Structure file(s) for 1Z8K Structure Factors (3828 Kb) Retrieve 1Z8K in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Z8K from S2C, [Save to disk] Re-refined 1z8k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Z8K in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Z8K

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Z8K, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1z8k_A] [1z8k] [1z8k_B] [1z8k_C] SWISS-PROT database: [Q9LS02] Domain organization of [AOC2_ARATH] by SWISSPFAM

Other resources with information on 1Z8K

Community annotation for 1Z8K at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---