1Z96 Crystal structure of the Mud1 UBA domain date
authors Trempe, J.F., Brown, N.R., Lowe, E.D., Noble, M.E.M., Gordon, C., Campbell, I.D., Johnson, L.N., Endicott, J.A.
compound source
symmetry
R_factor
R_Free 0.19593
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
note 1Z96 is a representative structure
Primary referenceMechanism of Lys48-linked polyubiquitin chain recognition by the Mud1 UBA domain., Trempe JF, Brown NR, Lowe ED, Gordon C, Campbell ID, Noble ME, Endicott JA, EMBO J 2005 Sep 21;24(18):3178-89. Epub 2005 Sep 1. PMID:16138082
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (1z96.pdb1.gz) 14 Kb
  • Biological Unit Coordinates (1z96.pdb2.gz) 13 Kb
  • CSU: Contacts of Structural Units for 1Z96
  • Likely Quarternary Molecular Structure file(s) for 1Z96
  • Structure Factors (158 Kb)
  • Retrieve 1Z96 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z96 from S2C, [Save to disk]
  • Re-refined 1z96 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Z96 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z96
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z96, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z96_A] [1z96] [1z96_B]
  • SWISS-PROT database: [Q10256]
  • Domain organization of [MUD1_SCHPO] by SWISSPFAM
  • Domain found in 1Z96: [UBA ] by SMART
  • Other resources with information on 1Z96
  • Community annotation for 1Z96 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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