1ZIM Leucine Zipper date Oct 30, 1996
title Gcn4-Leucine Zipper Core Mutant Asn16gln In The Trimeric Sta
authors L.Gonzalez Junior, D.N.Woolfson, T.Alber
compound source
Molecule: General Control Protein Gcn4
Chain: A, B, C
Synonym: Gcn4
Engineered: Yes
Mutation: Yes
Other_details: This Structure Is In The Trimeric State
 Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
symmetry Space Group: P 21 21 21
R_factor 0.178 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.240 46.610 50.830 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ACE enzyme
related structures by homologous chain: 1UO2, 1ZIJ
Primary referenceBuried polar residues and structural specificity in the GCN4 leucine zipper., Gonzalez L Jr, Woolfson DN, Alber T, Nat Struct Biol 1996 Dec;3(12):1011-8. PMID:8946854
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1zim.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 1ZIM
  • CSU: Contacts of Structural Units for 1ZIM
  • Likely Quarternary Molecular Structure file(s) for 1ZIM
  • Retrieve 1ZIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZIM from S2C, [Save to disk]
    • View 1ZIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZIM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ZIM, from MSDmotif at EBI
  • Genome occurence of 1ZIM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1zima_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1zimb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1zimc_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 1zim from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zim_A] [1zim] [1zim_C] [1zim_B]
  • SWISS-PROT database: [P03069]
  • Domain organization of [GCN4_YEAST] by SWISSPFAM
    • Other resources with information on 1ZIM
  • Community annotation for 1ZIM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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