1ZJD	Hydrolase, Blood Clotting	date	Apr 28, 2005
title	Crystal Structure Of The Catalytic Domain Of Coagulation Fac Complex With Kunitz Protease Inhibitor Domain Of Protease N
authors	L.Jin, D.Navaneetham, P.Pandey, J.E.Strickler, R.E.Babine, P.N.Wa S.S.Abdel-Meguid
compound		source
Molecule: Catalytic Domain Of Coagulation Factor Xi Chain: A Fragment: Catalytic Domain Synonym: Plasma Thromboplastin Antecedent; Pta; Fxi Ec: 3.4.21.27 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F11 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_cell_line: X-33
Molecule: Kunitz Protease Inhibitory Domain Of Protease Nex Chain: B Fragment: Inhibitory Domain Synonym: Amyloid Beta A4 Protein, Isoform B; App; Abpp; Alz Disease Amyloid Protein; Cerebral Vascular Amyloid Peptide; Protease Nexin-II; Pn-II; Appi; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: App, A4, Ad1f11 Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_cell_line: X-33
symmetry	Space Group: P 32 2 1	R_factor 0.216 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 92.791 92.791 107.014 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand		enzyme	Hydrolase E.C.3.4.21.27 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Structural and mutational analyses of the molecular interactions between the catalytic domain of factor Xla and the Kunitz protease inhibitor domain of protease nexin2., Navaneetham D, Jin L, Pandey P, Strickler JE, Babine RE, Abdel-Meguid SS, Walsh PN, J Biol Chem 2005 Aug 6;. PMID:16085935

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (1zjd.pdb1.gz) 48 Kb CSU: Contacts of Structural Units for 1ZJD Likely Quarternary Molecular Structure file(s) for 1ZJD Structure Factors (162 Kb) Retrieve 1ZJD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1ZJD from S2C, [Save to disk] Re-refined 1zjd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1ZJD in 3D

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Visual 3D analysis of 1ZJD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1ZJD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1zjd_B] [1zjd_A] [1zjd] SWISS-PROT database: [P05067] [P03951] Belongs to the amyloid β-protein peptide (aβpp) family according to TCDB. Domain organization of [A4_HUMAN] [FA11_HUMAN] by SWISSPFAM Domains found in 1ZJD: [KU] [Tryp_SPc ] by SMART

Other resources with information on 1ZJD

Community annotation for 1ZJD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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