1ZU1 Rna Binding Protein date May 29, 2005
title Solution Structure Of The N-Terminal Zinc Fingers Of The Xen Laevis Double Stranded Rna Binding Protein Zfa
authors H.M.Moller, M.A.Martinez-Yamout, H.J.Dyson, P.E.Wright
compound source
Molecule: Rna Binding Protein Zfa
Chain: A
Synonym: Dsrbp-Zfa
Engineered: Yes
Organism_scientific: Xenopus Laevis
Organism_common: African Clawed Frog
Organism_taxid: 8355
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: T7
Expression_system_plasmid: Pet21a
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the N-terminal zinc fingers of the Xenopus laevis double-stranded RNA-binding protein ZFa., Moller HM, Martinez-Yamout MA, Dyson HJ, Wright PE, J Mol Biol 2005 Aug 26;351(4):718-30. PMID:16051273
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (658 Kb) [Save to disk]
  • Biological Unit Coordinates (1zu1.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 1ZU1
  • CSU: Contacts of Structural Units for 1ZU1
  • Original NMR restraints for 1ZU1 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1ZU1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZU1 from S2C, [Save to disk]
  • View 1ZU1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZU1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZU1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zu1] [1zu1_A]
  • SWISS-PROT database: [Q8AVN9]
  • Domain organization of [ZN346_XENLA] by SWISSPFAM
  • Domains found in 1ZU1: [ZnF_C2H2] [ZnF_U1 ] by SMART
  • Other resources with information on 1ZU1
  • Community annotation for 1ZU1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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