2A5Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ATP, MG enzyme
note 2A5Y (Molecule of the Month:pdb177)
Gene
Ontology
ChainFunctionProcessComponent
A


B, C


Primary referenceStructure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans., Yan N, Chai J, Lee ES, Gu L, Liu Q, He J, Wu JW, Kokel D, Li H, Hao Q, Xue D, Shi Y, Nature. 2005 Oct 6;437(7060):831-7. PMID:16208361
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (2a5y.pdb1.gz) 175 Kb
  • LPC: Ligand-Protein Contacts for 2A5Y
  • CSU: Contacts of Structural Units for 2A5Y
  • Likely Quarternary Molecular Structure file(s) for 2A5Y
  • Retrieve 2A5Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A5Y from S2C, [Save to disk]
    • View 2A5Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a5y] [2a5y_A] [2a5y_B] [2a5y_C]
  • SWISS-PROT database: [P30429] [P41958]
  • Belongs to the bcl-2 (bcl-2) family according to TCDB.
  • Domains found in 2A5Y: [BCL] [BH4] [CARD ] by SMART

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