2A7H Hydrolase date Jul 05, 2005
title On The Routine Use Of Soft X-Rays In Macromolecular Crystall Part III- The Optimal Data Collection Wavelength
authors C.Mueller-Dieckmann, S.Panjikar, P.A.Tucker, M.S.Weiss
compound source
Molecule: Cationic Trypsin
Chain: A
Synonym: Beta-Trypsin, Fragment
Ec: 3.4.21.4
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 31 2 1
R_factor 0.166 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.190 54.190 105.860 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand CA, CL enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceOn the routine use of soft X-rays in macromolecular crystallography. Part III. The optimal data-collection wavelength., Mueller-Dieckmann C, Panjikar S, Tucker PA, Weiss MS, Acta Crystallogr D Biol Crystallogr 2005 Sep;61(Pt 9):1263-72. Epub 2005, Aug 16. PMID:16131760
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (2a7h.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 2A7H
  • CSU: Contacts of Structural Units for 2A7H
  • Likely Quarternary Molecular Structure file(s) for 2A7H
  • Structure Factors (74 Kb)
  • Retrieve 2A7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A7H from S2C, [Save to disk]
  • Re-refined 2a7h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A7H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2A7H, from MSDmotif at EBI
  • Fold representative 2a7h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a7h] [2a7h_A]
  • SWISS-PROT database: [P00760]
  • Domain organization of [TRY1_BOVIN] by SWISSPFAM
  • Domain found in 2A7H: [Tryp_SPc ] by SMART
  • Other resources with information on 2A7H
  • Community annotation for 2A7H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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