2AI0 Immune System date Jul 28, 2005
title Anti-Cocaine Antibody 7.5.21, Crystal Form III
authors E.Pozharski, A.Hewagama, A.Shanafelt, D.Ringe, G.A.Petsko
compound source
Molecule: Immunoglobulin Light Chain Kappa
Chain: L, M, N, O
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Strain: Balbc
Cell_line: Hybridoma

Molecule: Immunoglobulin Heavy Chain
Chain: H, I, J, K
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Strain: Balbc
Cell_line: Hybridoma
symmetry Space Group: P 21 21 2
R_factor 0.222 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
159.979 216.355 58.320 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand GOL, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (285 Kb) [Save to disk]
  • Biological Unit Coordinates (2ai0.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (2ai0.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (2ai0.pdb3.gz) 74 Kb
  • Biological Unit Coordinates (2ai0.pdb4.gz) 74 Kb
  • Biological Unit Coordinates (2ai0.pdb5.gz) 276 Kb
  • Biological Unit Coordinates (2ai0.pdb6.gz) 277 Kb
  • Biological Unit Coordinates (2ai0.pdb7.gz) 276 Kb
  • Biological Unit Coordinates (2ai0.pdb8.gz) 277 Kb
  • Biological Unit Coordinates (2ai0.pdb9.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 2AI0
  • CSU: Contacts of Structural Units for 2AI0
  • Likely Quarternary Molecular Structure file(s) for 2AI0
  • Structure Factors (799 Kb)
  • Retrieve 2AI0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AI0 from S2C, [Save to disk]
  • Re-refined 2ai0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2AI0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2AI0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2AI0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ai0_L] [2ai0] [2ai0_M] [2ai0_I] [2ai0_H] [2ai0_O] [2ai0_K] [2ai0_N] [2ai0_J]
  • SWISS-PROT database: [Q6PIP8]
  • Domain organization of [Q6PIP8_MOUSE] by SWISSPFAM
  • Domains found in 2AI0: [IG_like] [IGv ] by SMART
    • Other resources with information on 2AI0
  • Community annotation for 2AI0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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