2AXD	Transferase	date	Sep 05, 2005
title	Solution Structure Of The Theta Subunit Of Escherichia Coli Polymerase III In Complex With The Epsilon Subunit
authors	M.A.Keniry, A.Y.Park, E.A.Owen, S.M.Hamdan, G.Pintacuda, G.Otting N.E.Dixon
compound		source
Molecule: Dna Polymerase III, Theta Subunit Chain: S Ec: 2.7.7.7 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Hole Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcm869
method	Solution NMR
ligand		enzyme	Transferase E.C.2.7.7.7 BRENDA
Gene Ontology	Chain Function Process Component S DNA-directed DNA polymerase ...
Primary reference	Structure of the theta subunit of Escherichia coli DNA polymerase III in complex with the epsilon subunit., Keniry MA, Park AY, Owen EA, Hamdan SM, Pintacuda G, Otting G, Dixon NE, J Bacteriol. 2006 Jun;188(12):4464-73. PMID:16740953

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk] Biological Unit Coordinates (2axd.pdb1.gz) 21 Kb CSU: Contacts of Structural Units for 2AXD Original NMR restraints for 2AXD from PDB Retrieve 2AXD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2AXD from S2C, [Save to disk]

View 2AXD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2AXD

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2AXD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2axd_S] [2axd] SWISS-PROT database: [P0ABS8] Domain organization of [HOLE_ECOLI] by SWISSPFAM

Other resources with information on 2AXD

Community annotation for 2AXD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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