2B0A Structural Genomics, Unknown Function date Sep 13, 2005
title Crystal Structure Of Protein Mj0783 From Methanococcus Janna
authors Y.Patskovsky, U.Ramagopal, S.C.Almo, S.K.Burley, New York Sgx Re Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Hypothetical Protein Mj0783
Chain: A
Engineered: Yes
 Organism_scientific: Methanocaldococcus Jannaschii
Organism_taxid: 2190
Gene: Mj0783
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: C 1 2 1
R_factor 0.185 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.942 73.156 46.570 90.00 122.87 90.00
method X-Ray Diffractionresolution 1.45 Å
note 2B0A is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (2b0a.pdb1.gz) 65 Kb
  • CSU: Contacts of Structural Units for 2B0A
  • Likely Quarternary Molecular Structure file(s) for 2B0A
  • Structure Factors (222 Kb)
  • Retrieve 2B0A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B0A from S2C, [Save to disk]
  • Re-refined 2b0a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2B0A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2B0A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2B0A, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b0a] [2b0a_A]
  • SWISS-PROT database: [Q58193]
  • Domain organization of [Y783_METJA] by SWISSPFAM
    • Other resources with information on 2B0A
  • Community annotation for 2B0A at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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