OCA Atlas for 2B4T

2B4T

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

AES, NAD

enzyme

Gene

PF14

Gene
Ontology

Chain	Function	Process	Component
P, R, O, Q

Primary reference

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum at 2.25 A resolution reveals intriguing extra electron density in the active site., Robien MA, Bosch J, Buckner FS, Van Voorhis WC, Worthey EA, Myler P, Mehlin C, Boni EE, Kalyuzhniy O, Anderson L, Lauricella A, Gulde S, Luft JR, DeTitta G, Caruthers JM, Hodgson KO, Soltis M, Zucker F, Verlinde CL, Merritt EA, Schoenfeld LW, Hol WG, Proteins. 2006 Mar 15;62(3):570-7. PMID:16345073

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk]

Biological Unit Coordinates (2b4t.pdb1.gz) 207 Kb

LPC: Ligand-Protein Contacts for 2B4T

CSU: Contacts of Structural Units for 2B4T

Likely Quarternary Molecular Structure file(s) for 2B4T

Structure Factors (326 Kb)

Retrieve 2B4T in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2B4T from S2C, [Save to disk]

Re-refined 2b4t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2B4T in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2b4t] [2b4t_O] [2b4t_P] [2b4t_Q] [2b4t_R]

SWISS-PROT database: [Q8T6B1]

Domain found in 2B4T: [Gp_dh_N ] by SMART

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