2B6A Transferase date Sep 30, 2005
title Crystal Structure Of Hiv-1 Reverse Transcriptase (Rt) In Com Thr-50
authors M.L.Morningstar, T.Roth, M.K.Smith, M.Zajac, K.Watson, R.W.Buckhe W.Zhang, E.Arnold, C.J.Michejda
compound source
Molecule: Reverse Transcriptase P66 Subunit
Chain: A
Fragment: Residues 599-1158
Synonym: Hiv-1 Rt
Ec: 2.7.7.49
Engineered: Yes
Mutation: Yes
Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Gene: Pol
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bh10

Molecule: Reverse Transcriptase P51 Subunit
Chain: B
Fragment: Residues 599-1028
Synonym: Hiv-1 Rt
Ec: 2.7.7.49
Engineered: Yes
Mutation: Yes

Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Gene: Pol
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bh10
symmetry Space Group: C 1 2 1
R_factor 0.226 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
227.706 70.168 106.630 90.00 105.82 90.00
method X-Ray Diffractionresolution 2.65 Å
ligand T50 BindingDB enzyme Transferase E.C.2.7.7.49 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (2b6a.pdb1.gz) 157 Kb
  • LPC: Ligand-Protein Contacts for 2B6A
  • CSU: Contacts of Structural Units for 2B6A
  • Likely Quarternary Molecular Structure file(s) for 2B6A
  • Structure Factors (414 Kb)
  • Retrieve 2B6A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B6A from S2C, [Save to disk]
  • Re-refined 2b6a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2B6A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2B6A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2B6A, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b6a_B] [2b6a_A] [2b6a]
  • SWISS-PROT database: [P03366]
  • Domain organization of [POL_HV1B1] by SWISSPFAM
  • Other resources with information on 2B6A
  • Community annotation for 2B6A at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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