2B9Z Viral Protein date Oct 13, 2005
title Solution Structure Of Fhv B2, A Viral Suppressor Of Rnai
authors A.Lingel, B.Simon, E.Izaurralde, M.Sattler
compound source
Molecule: B2 Protein
Chain: A, B
Engineered: Yes
Organism_scientific: Flock House Virus
Organism_taxid: 12287
Gene: B2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm-11
methodSolution NMR
Primary referenceThe structure of the flock house virus B2 protein, a viral suppressor of RNA interference, shows a novel mode of double-stranded RNA recognition., Lingel A, Simon B, Izaurralde E, Sattler M, EMBO Rep 2005 Nov 4;. PMID:16270100
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (426 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2B9Z
  • Original NMR restraints for 2B9Z from PDB
  • Retrieve 2B9Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B9Z from S2C, [Save to disk]
  • View 2B9Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2B9Z
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2B9Z, from MSDmotif at EBI
  • Fold representative 2b9z from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b9z_B] [2b9z] [2b9z_A]
  • SWISS-PROT database: [P68831]
  • Domain organization of [B2_FHV] by SWISSPFAM
  • Other resources with information on 2B9Z
  • Community annotation for 2B9Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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