2BDI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CO, PBZ enzyme
Gene
Ontology
ChainFunctionProcessComponent
M, G, O, A, L, K, H, D, B, P, C, F, J, I, E, N


Primary referenceCrystal structures of human tissue kallikrein 4: activity modulation by a specific zinc binding site., Debela M, Magdolen V, Grimminger V, Sommerhoff C, Messerschmidt A, Huber R, Friedrich R, Bode W, Goettig P, J Mol Biol. 2006 Oct 6;362(5):1094-107. Epub 2006 Aug 3. PMID:16950394
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (555 Kb) [Save to disk]
  • Biological Unit Coordinates (2bdi.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb2.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb3.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb4.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb5.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb6.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb7.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb8.gz) 42 Kb
  • Biological Unit Coordinates (2bdi.pdb9.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2BDI
  • CSU: Contacts of Structural Units for 2BDI
  • Likely Quarternary Molecular Structure file(s) for 2BDI
  • Structure Factors (508 Kb)
  • Retrieve 2BDI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BDI from S2C, [Save to disk]
  • Re-refined 2bdi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2BDI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bdi] [2bdi_] [2bdi_A] [2bdi_B] [2bdi_C] [2bdi_D] [2bdi_E] [2bdi_F] [2bdi_G] [2bdi_H] [2bdi_I] [2bdi_J] [2bdi_K] [2bdi_L] [2bdi_M] [2bdi_N] [2bdi_O] [2bdi_P]
  • SWISS-PROT database: [Q9Y5K2]
  • Domain found in 2BDI: [Tryp_SPc ] by SMART

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