2BPI Oxidoreductase date Apr 20, 2005
title Structure Of Iron Dependent Superoxide Dismutase From P. Fal
authors I.W.Boucher, J.Brannigan, A.J.Wilkinson, M.Brzozowski
compound source
Molecule: Fe-Superoxide Dismutase
Chain: A, B
Ec: 1.15.1.1
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_taxid: 36329
Strain: 3d7
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pet 28c
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.941 78.910 90.621 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.52 Å
ligand FE enzyme Oxidoreductase E.C.1.15.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • superoxide dismutase activit...


  • Primary referenceThe crystal structure of superoxide dismutase from Plasmodium falciparum., Boucher IW, Brzozowski AM, Brannigan JA, Schnick C, Smith DJ, Kyes SA, Wilkinson AJ, BMC Struct Biol. 2006 Oct 4;6:20. PMID:17020617
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2bpi.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 2BPI
  • CSU: Contacts of Structural Units for 2BPI
  • Likely Quarternary Molecular Structure file(s) for 2BPI
  • Structure Factors (200 Kb)
  • Retrieve 2BPI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BPI from S2C, [Save to disk]
  • Re-refined 2bpi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 2BPI
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  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2BPI, from MSDmotif at EBI
  • Fold representative 2bpi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bpi_A] [2bpi_B] [2bpi]
  • SWISS-PROT database: [Q8IAY6]
  • Domain organization of [SODF_PLAF7] by SWISSPFAM
  • Other resources with information on 2BPI
  • Community annotation for 2BPI at PDBWiki (http://pdbwiki.org)
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