2BWE Signaling Protein date Jul 13, 2005
title The Crystal Structure Of The Complex Between The Uba And Ubl Of Dsk2
authors E.D.Lowe, N.Hasan, J.F.Trempe, L.Fonso, M.E.M.Noble, J.A.Endicot L.N.Johnson, N.R.Brown
compound source
Molecule: Dsk2
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R
Fragment: Uba Domain, Residues 324-327
Engineered: Yes
Other_details: Uba Domain Of Dsk2, Residues 326-373 Of The Protein;
Organism_scientific: Saccharomyces Cerevisiae
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)Plyss
Expression_system_plasmid: Pgex-Kg

Molecule: Dsk2
Chain: S, T, U
Fragment: Ubl Domain, Residues 1-75
Engineered: Yes
Other_details: Ubl Domain Of Dsk2, Residues 1-75 Of The Int Protein

Organism_scientific: Saccharomyces Cerevisiae
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)Plyss
Expression_system_plasmid: Pgex-Kg
symmetry Space Group: P 1 21 1
R_factor 0.239 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.361 88.854 141.497 90.00 106.09 90.00
method X-Ray Diffractionresolution 3.10 Å
Primary referenceStructures of the Dsk2 UBL and UBA domains and their complex., Lowe ED, Hasan N, Trempe JF, Fonso L, Noble ME, Endicott JA, Johnson LN, Brown NR, Acta Crystallogr D Biol Crystallogr. 2006 Feb;62(Pt 2):177-88. Epub 2006, Jan 18. PMID:16421449
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (2bwe.pdb1.gz) 78 Kb
  • Biological Unit Coordinates (2bwe.pdb2.gz) 49 Kb
  • Biological Unit Coordinates (2bwe.pdb3.gz) 43 Kb
  • CSU: Contacts of Structural Units for 2BWE
  • Likely Quarternary Molecular Structure file(s) for 2BWE
  • Structure Factors (253 Kb)
  • Retrieve 2BWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BWE from S2C, [Save to disk]
  • Re-refined 2bwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BWE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BWE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bwe_Q] [2bwe_I] [2bwe] [2bwe_E] [2bwe_G] [2bwe_C] [2bwe_H] [2bwe_B] [2bwe_D] [2bwe_N] [2bwe_M] [2bwe_L] [2bwe_P] [2bwe_J] [2bwe_R] [2bwe_K] [2bwe_T] [2bwe_A] [2bwe_U] [2bwe_F] [2bwe_O] [2bwe_S]
  • SWISS-PROT database: [P48510]
  • Domain organization of [DSK2_YEAST] by SWISSPFAM
  • Domains found in 2BWE: [UBA] [UBQ ] by SMART
  • Other resources with information on 2BWE
  • Community annotation for 2BWE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science