2BXW	Inhibitor	date	Jul 27, 2005
title	Crystal Structure Of Rhogdi Lys(135,138,141)Tyr Mutant
authors	M.Sikorska, D.R.Cooper, J.Otlewski, Z.S.Derewenda
compound		source
Molecule: Rho Gdp-Dissociation Inhibitor 1 Chain: A, B Fragment: Isoprenyl-Binding Domain, Residues 67-204 Synonym: Rho Gdi 1, Rho-Gdi Alpha Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector: Pgst-Parallel1 Expression_system_plasmid: Rhogdiy135, 138, 141y
symmetry	Space Group: P 31 2 1	R_factor 0.178 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.308 77.308 171.659 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	FMT, TRS	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Protein crystallization by surface entropy reduction: optimization of the SER strategy., Cooper DR, Boczek T, Grelewska K, Pinkowska M, Sikorska M, Zawadzki M, Derewenda Z, Acta Crystallogr D Biol Crystallogr. 2007 May;63(Pt 5):636-45. Epub 2007, Apr 21. PMID:17452789

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (2bxw.pdb1.gz) 25 Kb Biological Unit Coordinates (2bxw.pdb2.gz) 25 Kb LPC: Ligand-Protein Contacts for 2BXW CSU: Contacts of Structural Units for 2BXW Likely Quarternary Molecular Structure file(s) for 2BXW Structure Factors (352 Kb) Retrieve 2BXW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BXW from S2C, [Save to disk] Re-refined 2bxw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BXW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BXW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BXW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bxw] [2bxw_B] [2bxw_A] SWISS-PROT database: [P52565] Domain organization of [GDIR1_HUMAN] by SWISSPFAM

Other resources with information on 2BXW

Community annotation for 2BXW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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