2BZE Transcription Regulation date Aug 16, 2005
title Nmr Structure Of Human Rtf1 Plus3 Domain.
authors V.Truffault, T.Diercks, E.Ab, R.N.De Jong, M.A.Daniels, R.Kaptein G.E.Folkers, Structural Proteomics In Europe (Spine)
compound source
Molecule: Kiaa0252 Protein
Chain: A
Fragment: Plus3, Residues 228-359
Synonym: Rft1 Plus3 Domain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Ril
Expression_system_plasmid: Pet15b
Other_details: Self Made Cdna Library Of Multiple Human Car Cell Lines
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and DNA binding of the human rtf1 plus3 domain., de Jong RN, Truffault V, Diercks T, Ab E, Daniels MA, Kaptein R, Folkers GE, Structure. 2008 Jan;16(1):149-59. PMID:18184592
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (994 Kb) [Save to disk]
  • Biological Unit Coordinates (2bze.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2BZE
  • Original NMR restraints for 2BZE from PDB
  • Retrieve 2BZE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BZE from S2C, [Save to disk]
    • View 2BZE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2BZE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BZE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bze] [2bze_A]
  • SWISS-PROT database: [Q92541]
  • Domain organization of [RTF1_HUMAN] by SWISSPFAM
  • Domain found in 2BZE: [Plus3 ] by SMART
    • Other resources with information on 2BZE
  • Community annotation for 2BZE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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