2C95 Transferase date Dec 09, 2005
title Structure Of Adenylate Kinase 1 In Complex With P1,P4-Di(Ade Tetraphosphate
authors G.Bunkoczi, P.Filippakopoulos, A.Jansson, E.Longman, F.Von Delft A.Edwards, C.Arrowsmith, M.Sundstrom, S.Knapp
compound source
Molecule: Adenylate Kinase 1
Chain: A, B
Synonym: Atp-Amp Transphosphorylase, Ak1, Myokinase
Ec: 2.7.4.3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plic-Sgc
symmetry Space Group: P 21 21 21
R_factor 0.176 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.535 69.998 88.558 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.71 Å
ligand B4P, MLI enzyme Transferase E.C.2.7.4.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • adenylate kinase activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (2c95.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (2c95.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 2C95
  • CSU: Contacts of Structural Units for 2C95
  • Likely Quarternary Molecular Structure file(s) for 2C95
  • Structure Factors (509 Kb)
  • Retrieve 2C95 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C95 from S2C, [Save to disk]
  • Re-refined 2c95 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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    • Visual 3D analysis of 2C95
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C95, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c95] [2c95_A] [2c95_B]
  • SWISS-PROT database: [P00568]
  • Domain organization of [KAD1_HUMAN] by SWISSPFAM
    • Other resources with information on 2C95
  • Community annotation for 2C95 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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  • Adenylate Kinase (the movie)
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