2CDE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructure and binding kinetics of three different human CD1d-alpha-galactosylceramide-specific T cell receptors., Gadola SD, Koch M, Marles-Wright J, Lissin NM, Shepherd D, Matulis G, Harlos K, Villiger PM, Stuart DI, Jakobsen BK, Cerundolo V, Jones EY, J Exp Med. 2006 Mar 20;203(3):699-710. Epub 2006 Mar 6. PMID:16520393
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk]
  • Biological Unit Coordinates (2cde.pdb1.gz) 71 Kb
  • Biological Unit Coordinates (2cde.pdb2.gz) 72 Kb
  • Biological Unit Coordinates (2cde.pdb3.gz) 72 Kb
  • CSU: Contacts of Structural Units for 2CDE
  • Likely Quarternary Molecular Structure file(s) for 2CDE
  • Structure Factors (192 Kb)
  • Retrieve 2CDE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CDE from S2C, [Save to disk]
  • Re-refined 2cde structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2CDE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cde_F] [2cde] [2cde_A] [2cde_B] [2cde_C] [2cde_D] [2cde_E]
  • SWISS-PROT database:
  • Domains found in 2CDE: [IG_like] [IGc1] [IGv ] by SMART

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