2CDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE, SO4 enzyme
Primary referenceUnveiling the molecular mechanism of a conjugative relaxase: The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site., Boer R, Russi S, Guasch A, Lucas M, Blanco AG, Perez-Luque R, Coll M, de la Cruz F, J Mol Biol. 2006 May 5;358(3):857-69. Epub 2006 Feb 28. PMID:16540117
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (2cdm.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2cdm.pdb2.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 2CDM
  • CSU: Contacts of Structural Units for 2CDM
  • Likely Quarternary Molecular Structure file(s) for 2CDM
  • Structure Factors (390 Kb)
  • Retrieve 2CDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CDM from S2C, [Save to disk]
  • Re-refined 2cdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2CDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cdm] [2cdm_A] [2cdm_B] [2cdm_C] [2cdm_D]
  • SWISS-PROT database: [Q47673]

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